Human SNP ID | rs4276643 |
---|---|
Human chromosome | chr8 |
Human SNP position | 27946082 |
Pig chromosome | chr14 |
Pig SNP position | 12925863 |
PubMed ID | 26486471 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26486471 |
Study | Genome-wide association studies identify genetic loci for low von Willebrand factor levels. |
Disease/Trait | Low vWF levels |
Initial sample | up to 1,635 European ancestry individuals with low vWF levels, up to 33,286 European ancestry individuals with normal vWF levels |
Replication sample | NA |
Region | 8p21.1 |
Chromosome id | chr8 |
Chromosome position | 27946082 |
Reported gene | SCARA5 |
Mapped gene | SCARA5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 286133 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4276643-? |
SNPs | rs4276643 |
Merged | 0 |
SNP id current | 4276643 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | von Willebrand factor measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004629 |
Study accession | GCST003210 |