SNP Detail For rs4252185
1.Mapping Information
Human SNP ID rs4252185
Human chromosome chr6
Human SNP position 160702419
Pig chromosome chr1
Pig SNP position 8740303
2.Annotation Information
PubMed ID26343387
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26343387
StudyA comprehensive 1000 Genomes-based genome-wide association meta-analysis of coronary artery disease.
Disease/TraitCoronary artery disease
Initial sample42,096 European ancestry cases, 361 African American cases, 758 Hispanic American cases, 12,658 South Asian ancestry cases, 1,802 Lebanese ancestry cases, 3,614 East Asian ancestry cases, 99,121 European ancestry controls, 2,778 African American controls,
Replication sampleNA
Region6q26
Chromosome idchr6
Chromosome position160702419
Reported genePLG
Mapped genePLG
Upstream gene id
Downstream gene id
SNP gene ids5340
Upstream gene distance
Downstream gene distance
SNP risk allelers4252185-C
SNPsrs4252185
Merged
SNP id current4252185
Contextintron_variant
Intergenic0
Allele frequency0.059661
P value2E-32
Pvalue mlog31.698970004336
P value text
Or beta1.34
%95 Ci[1.28- 1.41]
PlatformAffymetrix, Illumina [8600000] (imputed)
CNVN
Mapped traitcoronary artery disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000378
Study accessionGCST003116