SNP Detail For rs424950
1.Mapping Information
Human SNP ID rs424950
Human chromosome chr1
Human SNP position 163987266
Pig chromosome chr4
Pig SNP position 94391820
2.Annotation Information
PubMed ID22675492
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22675492
StudyGenome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women.
Disease/TraitSex hormone-binding globulin levels
Initial sample1,598 European ancestry female individuals
Replication sampleNA
Region1q23.3
Chromosome idchr1
Chromosome position163987266
Reported geneintergenic
Mapped geneLOC105371521 - LOC105371527
Upstream gene id105371521
Downstream gene id105371527
SNP gene ids
Upstream gene distance144774
Downstream gene distance441497
SNP risk allelers424950-C
SNPsrs424950
Merged0
SNP id current424950
Contextintergenic_variant
Intergenic1
Allele frequency0.48
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.076
%95 Ci[NR] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitsex hormone globulin binding measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004696
Study accessionGCST001554