Human SNP ID | rs424950 |
---|---|
Human chromosome | chr1 |
Human SNP position | 163987266 |
Pig chromosome | chr4 |
Pig SNP position | 94391820 |
PubMed ID | 22675492 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22675492 |
Study | Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women. |
Disease/Trait | Sex hormone-binding globulin levels |
Initial sample | 1,598 European ancestry female individuals |
Replication sample | NA |
Region | 1q23.3 |
Chromosome id | chr1 |
Chromosome position | 163987266 |
Reported gene | intergenic |
Mapped gene | LOC105371521 - LOC105371527 |
Upstream gene id | 105371521 |
Downstream gene id | 105371527 |
SNP gene ids | |
Upstream gene distance | 144774 |
Downstream gene distance | 441497 |
SNP risk allele | rs424950-C |
SNPs | rs424950 |
Merged | 0 |
SNP id current | 424950 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.48 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.076 |
%95 Ci | [NR] unit increase |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | sex hormone globulin binding measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004696 |
Study accession | GCST001554 |