Human SNP ID | rs4245213 |
---|---|
Human chromosome | chr11 |
Human SNP position | 120402888 |
Pig chromosome | chr9 |
Pig SNP position | 52645660 |
PubMed ID | 25637523 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25637523 |
Study | ARHGEF12 influences the risk of glaucoma by increasing intraocular pressure. |
Disease/Trait | Intraocular pressure |
Initial sample | 8,015 individuals |
Replication sample | 7,471 individuals |
Region | 11q23.3 |
Chromosome id | chr11 |
Chromosome position | 120402888 |
Reported gene | genic |
Mapped gene | ARHGEF12 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23365 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4245213-A |
SNPs | rs4245213 |
Merged | 0 |
SNP id current | 4245213 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.17 |
%95 Ci | [0.092-0.248] unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | intraocular pressure measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004695 |
Study accession | GCST002767 |