SNP Detail For rs4243830
1.Mapping Information
Human SNP ID rs4243830
Human chromosome chr1
Human SNP position 6517811
Pig chromosome chr6
Pig SNP position 62326315
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region1p36.31
Chromosome idchr1
Chromosome position6517811
Reported geneNOL9
Mapped genePLEKHG5
Upstream gene id
Downstream gene id
SNP gene ids57449
Upstream gene distance
Downstream gene distance
SNP risk allelers4243830-C
SNPsrs4243830
Merged0
SNP id current4243830
Contextintron_variant
Intergenic0
Allele frequency0.11
P value0.000008
Pvalue mlog5.09691001300805
P value text(EA, men)
Or beta0.03
%95 Ci[0.017-0.043] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783