SNP Detail For rs4243774
1.Mapping Information
Human SNP ID rs4243774
Human chromosome chr1
Human SNP position 84891195
Pig chromosome chr6
Pig SNP position 119298659
2.Annotation Information
PubMed ID24665060
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24665060
StudyGenome-wide association study of smoking behaviours among Bangladeshi adults.
Disease/TraitSmoking cessation
Initial sample366 Bangladeshi ancestry former smoker males, 87 Bangladeshi ancestry former smoker females, 1,471 Bangladeshi ancestry current smoker males, 111 Bangladeshi ancestry current smoker females
Replication sampleNA
Region1p22.3
Chromosome idchr1
Chromosome position84891195
Reported geneNR
Mapped geneLPAR3
Upstream gene id
Downstream gene id
SNP gene ids23566
Upstream gene distance
Downstream gene distance
SNP risk allelers4243774-?
SNPsrs4243774
Merged0
SNP id current4243774
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitsmoking cessation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004319
Study accessionGCST002395