Human SNP ID | rs4238010 |
---|---|
Human chromosome | chr12 |
Human SNP position | 4009151 |
Pig chromosome | chr5 |
Pig SNP position | 68642390 |
PubMed ID | 19107115 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/19107115 |
Study | Genome-wide association study of recurrent major depressive disorder in two European case-control cohorts. |
Disease/Trait | Major depressive disorder |
Initial sample | 1,359 European ancestry cases, 1,782 European ancestry controls |
Replication sample | NA |
Region | 12p13.32 |
Chromosome id | chr12 |
Chromosome position | 4009151 |
Reported gene | CCND2 |
Mapped gene | LOC105369610 - LOC105369611 |
Upstream gene id | 105369610 |
Downstream gene id | 105369611 |
SNP gene ids | |
Upstream gene distance | 43437 |
Downstream gene distance | 3876 |
SNP risk allele | rs4238010-G |
SNPs | rs4238010 |
Merged | 0 |
SNP id current | 4238010 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.02 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.72 |
%95 Ci | |
Platform | Affymetrix, Illumina [494678] (imputed) |
CNV | N |
Mapped trait | unipolar depression |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761 |
Study accession | GCST000304 |