SNP Detail For rs4236709
1.Mapping Information
Human SNP ID rs4236709
Human chromosome chr8
Human SNP position 32552592
Pig chromosome chr15
Pig SNP position 60194454
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region8p12
Chromosome idchr8
Chromosome position32552592
Reported geneNRG1
Mapped geneNRG1
Upstream gene id
Downstream gene id
SNP gene ids3084
Upstream gene distance
Downstream gene distance
SNP risk allelers4236709-A
SNPsrs4236709
Merged0
SNP id current4236709
Contextintron_variant
Intergenic0
Allele frequency0.784
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.013
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265