SNP Detail For rs42039
1.Mapping Information
Human SNP ID rs42039
Human chromosome chr7
Human SNP position 92615108
Pig chromosome chr9
Pig SNP position 79250123
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region7q21.2
Chromosome idchr7
Chromosome position92615108
Reported geneCDK6
Mapped geneCDK6
Upstream gene id
Downstream gene id
SNP gene ids1021
Upstream gene distance
Downstream gene distance
SNP risk allelers42039-T
SNPsrs42039
Merged0
SNP id current42039
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.266
P value4E-88
Pvalue mlog87.397940008672
P value text
Or beta0.068
%95 Ci[0.062-0.074] unit increase
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647