SNP Detail For rs417387
1.Mapping Information
Human SNP ID rs417387
Human chromosome chr3
Human SNP position 42530054
Pig chromosome chr13
Pig SNP position 28732342
2.Annotation Information
PubMed ID26545630
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/26545630
StudyA potential endophenotype for Alzheimer__s disease: cerebrospinal fluid clusterin.
Disease/TraitCerebrospinal fluid clusterin levels
Initial sample300 Alzheimer__s disease cases, 373 controls
Replication sampleNA
Region3p22.1
Chromosome idchr3
Chromosome position42530054
Reported geneVIPR1
Mapped geneVIPR1
Upstream gene id
Downstream gene id
SNP gene ids7433
Upstream gene distance
Downstream gene distance
SNP risk allelers417387-?
SNPsrs417387
Merged
SNP id current417387
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.353
%95 Ci[NR] unit decrease
PlatformIllumina [5970354] (imputed)
CNVN
Mapped traitcerebrospinal fluid clusterin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007657
Study accessionGCST003134