Human SNP ID | rs417387 |
---|---|
Human chromosome | chr3 |
Human SNP position | 42530054 |
Pig chromosome | chr13 |
Pig SNP position | 28732342 |
PubMed ID | 26545630 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/26545630 |
Study | A potential endophenotype for Alzheimer__s disease: cerebrospinal fluid clusterin. |
Disease/Trait | Cerebrospinal fluid clusterin levels |
Initial sample | 300 Alzheimer__s disease cases, 373 controls |
Replication sample | NA |
Region | 3p22.1 |
Chromosome id | chr3 |
Chromosome position | 42530054 |
Reported gene | VIPR1 |
Mapped gene | VIPR1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7433 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs417387-? |
SNPs | rs417387 |
Merged | |
SNP id current | 417387 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.353 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [5970354] (imputed) |
CNV | N |
Mapped trait | cerebrospinal fluid clusterin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007657 |
Study accession | GCST003134 |