SNP Detail For rs415430
1.Mapping Information
Human SNP ID rs415430
Human chromosome chr17
Human SNP position 46781778
Pig chromosome JH118614-1
Pig SNP position 84580
2.Annotation Information
PubMed ID21812969
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21812969
StudyGenome-wide association study identifies candidate genes for Parkinson__s disease in an Ashkenazi Jewish population.
Disease/TraitParkinson__s disease
Initial sample268 Ashkenazi Jewish cases, 178 Ashkenazi Jewish controls
Replication sample1,782 European ancestry cases, 1,658 European ancestry controls
Region17q21.31
Chromosome idchr17
Chromosome position46781778
Reported geneWNT3
Mapped geneWNT3
Upstream gene id
Downstream gene id
SNP gene ids7473
Upstream gene distance
Downstream gene distance
SNP risk allelers415430-T
SNPsrs415430
Merged0
SNP id current415430
Contextintron_variant
Intergenic0
Allele frequency0.786
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [525124]
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001189