SNP Detail For rs4150581
1.Mapping Information
Human SNP ID rs4150581
Human chromosome chr11
Human SNP position 18335723
Pig chromosome chr2
Pig SNP position 43949418
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite ratios
Initial sampleUp to 5,591 European ancestry individuals
Replication sampleUp to 1,767 European ancestry individuals
Region11p15.1
Chromosome idchr11
Chromosome position18335723
Reported geneHPS5
Mapped geneGTF2H1
Upstream gene id
Downstream gene id
SNP gene ids2965
Upstream gene distance
Downstream gene distance
SNP risk allelers4150581-A
SNPsrs4150581
Merged0
SNP id current4150581
Contextintron_variant
Intergenic0
Allele frequency0.45
P value2E-37
Pvalue mlog36.698970004336
P value text(3-(4-hydroxyphenyl)lactate/alpha-hydroxyisovalerate)
Or beta0.043
%95 Ci[0.037-0.049] unit decrease
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002442