Human SNP ID | rs4150581 |
---|---|
Human chromosome | chr11 |
Human SNP position | 18335723 |
Pig chromosome | chr2 |
Pig SNP position | 43949418 |
PubMed ID | 24816252 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24816252 |
Study | An atlas of genetic influences on human blood metabolites. |
Disease/Trait | Blood metabolite ratios |
Initial sample | Up to 5,591 European ancestry individuals |
Replication sample | Up to 1,767 European ancestry individuals |
Region | 11p15.1 |
Chromosome id | chr11 |
Chromosome position | 18335723 |
Reported gene | HPS5 |
Mapped gene | GTF2H1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2965 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4150581-A |
SNPs | rs4150581 |
Merged | 0 |
SNP id current | 4150581 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 2E-37 |
Pvalue mlog | 36.698970004336 |
P value text | (3-(4-hydroxyphenyl)lactate/alpha-hydroxyisovalerate) |
Or beta | 0.043 |
%95 Ci | [0.037-0.049] unit decrease |
Platform | Affymetrix, Illumina [2100000] (imputed) |
CNV | N |
Mapped trait | blood metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005664 |
Study accession | GCST002442 |