Human SNP ID | rs4149311 |
---|---|
Human chromosome | chr9 |
Human SNP position | 104826496 |
Pig chromosome | chr1 |
Pig SNP position | 275751104 |
PubMed ID | 23049088 |
---|---|
Journal | Invest Ophthalmol Vis Sci |
Link | www.ncbi.nlm.nih.gov/pubmed/23049088 |
Study | A genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population. |
Disease/Trait | Myopia (pathological) |
Initial sample | 187 European ancestry cases, 1064 European ancestry controls |
Replication sample | |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 104826496 |
Reported gene | ABCA1 |
Mapped gene | ABCA1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 19 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4149311-? |
SNPs | rs4149311 |
Merged | 0 |
SNP id current | 4149311 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.134 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [152234] |
CNV | N |
Mapped trait | pathological myopia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004207 |
Study accession | GCST001712 |