SNP Detail For rs4149310
1.Mapping Information
Human SNP ID rs4149310
Human chromosome chr9
Human SNP position 104826853
Pig chromosome chr1
Pig SNP position 275751462
2.Annotation Information
PubMed ID22916037
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22916037
StudyNovel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis.
Disease/TraitMetabolite levels
Initial sample6,608 European ancestry individuals
Replication sampleNA
Region9q31.1
Chromosome idchr9
Chromosome position104826853
Reported geneABCA1
Mapped geneABCA1
Upstream gene id
Downstream gene id
SNP gene ids19
Upstream gene distance
Downstream gene distance
SNP risk allelers4149310-?
SNPsrs4149310
Merged0
SNP id current4149310
Contextintron_variant
Intergenic0
Allele frequency0.1
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2000000] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST001639