Human SNP ID | rs4149310 |
---|---|
Human chromosome | chr9 |
Human SNP position | 104826853 |
Pig chromosome | chr1 |
Pig SNP position | 275751462 |
PubMed ID | 22916037 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22916037 |
Study | Novel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis. |
Disease/Trait | Metabolite levels |
Initial sample | 6,608 European ancestry individuals |
Replication sample | NA |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 104826853 |
Reported gene | ABCA1 |
Mapped gene | ABCA1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 19 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4149310-? |
SNPs | rs4149310 |
Merged | 0 |
SNP id current | 4149310 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 2000000] (imputed) |
CNV | N |
Mapped trait | coronary artery calcification |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004723 |
Study accession | GCST001639 |