Human SNP ID | rs4148247 |
---|---|
Human chromosome | chr6 |
Human SNP position | 30571428 |
Pig chromosome | chr7 |
Pig SNP position | 26795868 |
PubMed ID | 26379185 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26379185 |
Study | No Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity. |
Disease/Trait | Mild influenza (H1N1) infection |
Initial sample | 107 European ancestry mild cases, 549 European ancestry population controls |
Replication sample | NA |
Region | 6p21.33 |
Chromosome id | chr6 |
Chromosome position | 30571428 |
Reported gene | GCN20, ABCF1 |
Mapped gene | ABCF1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4148247-? |
SNPs | rs4148247 |
Merged | |
SNP id current | 4148247 |
Context | 5_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.0167 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 5.963 |
%95 Ci | [5.27-6.66] |
Platform | Affymetrix [547296] |
CNV | N |
Mapped trait | influenza A (H1N1) |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_1001488 |
Study accession | GCST003124 |