SNP Detail For rs4148247
1.Mapping Information
Human SNP ID rs4148247
Human chromosome chr6
Human SNP position 30571428
Pig chromosome chr7
Pig SNP position 26795868
2.Annotation Information
PubMed ID26379185
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26379185
StudyNo Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.
Disease/TraitMild influenza (H1N1) infection
Initial sample107 European ancestry mild cases, 549 European ancestry population controls
Replication sampleNA
Region6p21.33
Chromosome idchr6
Chromosome position30571428
Reported geneGCN20, ABCF1
Mapped geneABCF1
Upstream gene id
Downstream gene id
SNP gene ids23
Upstream gene distance
Downstream gene distance
SNP risk allelers4148247-?
SNPsrs4148247
Merged
SNP id current4148247
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.0167
P value0.00000001
Pvalue mlog8
P value text
Or beta5.963
%95 Ci[5.27-6.66]
PlatformAffymetrix [547296]
CNVN
Mapped traitinfluenza A (H1N1)
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1001488
Study accessionGCST003124