SNP Detail For rs4145462
1.Mapping Information
Human SNP ID rs4145462
Human chromosome chr1
Human SNP position 167749262
Pig chromosome chr4
Pig SNP position 90956591
2.Annotation Information
PubMed ID22881374
JournalAnn Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22881374
StudyGenome-wide association and linkage study in the Amish detects a novel candidate late-onset Alzheimer disease gene.
Disease/TraitAlzheimer__s disease (late onset)
Initial sample109 Amish cases, 689 Amish controls
Replication sampleNA
Region1q24.2
Chromosome idchr1
Chromosome position167749262
Reported geneMPZL1
Mapped geneMPZL1
Upstream gene id
Downstream gene id
SNP gene ids9019
Upstream gene distance
Downstream gene distance
SNP risk allelers4145462-T
SNPsrs4145462
Merged0
SNP id current4145462
Contextintron_variant
Intergenic0
Allele frequency0.05
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformAffymetrix [614963]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001658