Human SNP ID | rs4141819 |
---|---|
Human chromosome | chr2 |
Human SNP position | 67637543 |
Pig chromosome | chr3 |
Pig SNP position | 78050366 |
PubMed ID | 23104006 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23104006 |
Study | Genome-wide association meta-analysis identifies new endometriosis risk loci. |
Disease/Trait | Endometriosis |
Initial sample | 3,181 European ancestry cases, 8,075 European ancestry controls, 1,423 Japanese ancestry cases, 1,318 Japanese ancestry controls |
Replication sample | 1,044 Japanese ancestry, 4,017 Japanese ancestry controls |
Region | 2p14 |
Chromosome id | chr2 |
Chromosome position | 67637543 |
Reported gene | NR |
Mapped gene | LOC102724373 - LOC101927701 |
Upstream gene id | 102724373 |
Downstream gene id | 101927701 |
SNP gene ids | |
Upstream gene distance | 38776 |
Downstream gene distance | 158511 |
SNP risk allele | rs4141819-C |
SNPs | rs4141819 |
Merged | 0 |
SNP id current | 4141819 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.309 |
P value | 0.00000009 |
Pvalue mlog | 7.04575749056067 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.09-1.21] |
Platform | Illumina [407632] |
CNV | N |
Mapped trait | endometriosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001065 |
Study accession | GCST001720 |