Human SNP ID | rs4140885 |
---|---|
Human chromosome | chr2 |
Human SNP position | 187468337 |
Pig chromosome | chr15 |
Pig SNP position | 102539125 |
PubMed ID | 23583979 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23583979 |
Study | Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders. |
Disease/Trait | Heart rate |
Initial sample | 85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals |
Replication sample | 88,823 European ancestry individuals |
Region | 2q32.1 |
Chromosome id | chr2 |
Chromosome position | 187468337 |
Reported gene | TFPI |
Mapped gene | LOC105373786, TFPI |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105373786, 7035 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4140885-A |
SNPs | rs4140885 |
Merged | 0 |
SNP id current | 4140885 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.317 |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | 0.217 |
%95 Ci | [0.12-0.31] unit increase |
Platform | Affymetrix, Illumina [2516789] (imputed) |
CNV | N |
Mapped trait | heart rate |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004326 |
Study accession | GCST001969 |