SNP Detail For rs4140885
1.Mapping Information
Human SNP ID rs4140885
Human chromosome chr2
Human SNP position 187468337
Pig chromosome chr15
Pig SNP position 102539125
2.Annotation Information
PubMed ID23583979
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583979
StudyIdentification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
Disease/TraitHeart rate
Initial sample85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals
Replication sample88,823 European ancestry individuals
Region2q32.1
Chromosome idchr2
Chromosome position187468337
Reported geneTFPI
Mapped geneLOC105373786, TFPI
Upstream gene id
Downstream gene id
SNP gene ids105373786, 7035
Upstream gene distance
Downstream gene distance
SNP risk allelers4140885-A
SNPsrs4140885
Merged0
SNP id current4140885
Contextintron_variant
Intergenic0
Allele frequency0.317
P value0.00000005
Pvalue mlog7.30102999566398
P value text
Or beta0.217
%95 Ci[0.12-0.31] unit increase
PlatformAffymetrix, Illumina [2516789] (imputed)
CNVN
Mapped traitheart rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004326
Study accessionGCST001969