SNP Detail For rs41300938
1.Mapping Information
Human SNP ID rs41300938
Human chromosome chrX
Human SNP position 143629396
Pig chromosome chrX
Pig SNP position 133685104
2.Annotation Information
PubMed ID26379185
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26379185
StudyNo Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.
Disease/TraitSevere influenza A (H1N1) infection
Initial sample49 European ancestry severe cases, 549 European ancestry population controls
Replication sampleNA
RegionXq27.3
Chromosome idchrX
Chromosome position143629396
Reported geneSLITRK4
Mapped geneSLITRK4
Upstream gene id
Downstream gene id
SNP gene ids139065
Upstream gene distance
Downstream gene distance
SNP risk allelers41300938-?
SNPsrs41300938
Merged
SNP id current41300938
Contextsynonymous_variant
Intergenic0
Allele frequency0
P value0.0000000000000002
Pvalue mlog15.698970004336
P value text
Or beta
%95 Ci
PlatformAffymetrix [547296]
CNVN
Mapped traitinfluenza A (H1N1)
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1001488
Study accessionGCST003123