SNP Detail For rs41297816
1.Mapping Information
Human SNP ID rs41297816
Human chromosome chr22
Human SNP position 19776455
Pig chromosome chr14
Pig SNP position 54940330
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample1,505 Ashkenazi Jewish founder cases, 2,553 Ashkenazi Jewish founder controls
Replication sampleNA
Region22q11.21
Chromosome idchr22
Chromosome position19776455
Reported geneTBX1, GNB1L
Mapped geneTBX1
Upstream gene id
Downstream gene id
SNP gene ids6899
Upstream gene distance
Downstream gene distance
SNP risk allelers41297816-G
SNPsrs41297816
Merged
SNP id current41297816
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text
Or beta1.3513513
%95 Ci[NR]
PlatformIllumina [up to 9792010] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003050