SNP Detail For rs4129059
1.Mapping Information
Human SNP ID rs4129059
Human chromosome chr1
Human SNP position 214502778
Pig chromosome chr9
Pig SNP position 141948401
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment (interaction)
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region1q41 x 3p14.1
Chromosome idchr1 x 3
Chromosome position214502778 x 65672627
Reported geneNR x NR
Mapped genePTPN14 x MAGI1
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers4129059-? x rs1499503-?
SNPsrs4129059 x rs1499503
Merged
SNP id current
Contextintron_variant x intron_variant
Intergenic
Allele frequencyNR
P value0.000000008
Pvalue mlog8.09691001300805
P value text
Or beta
%95 Ci
PlatformIllumina [629437] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002487