Human SNP ID | rs41279633 |
---|---|
Human chromosome | chr7 |
Human SNP position | 44541277 |
Pig chromosome | chr18 |
Pig SNP position | 55630362 |
PubMed ID | 25961943 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25961943 |
Study | The impact of low-frequency and rare variants on lipid levels. |
Disease/Trait | LDL cholesterol |
Initial sample | up 62,166 European ancestry individuals |
Replication sample | NA |
Region | 7p13 |
Chromosome id | chr7 |
Chromosome position | 44541277 |
Reported gene | NPC1L1 |
Mapped gene | NPC1L1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 29881 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs41279633-T |
SNPs | rs41279633 |
Merged | |
SNP id current | 41279633 |
Context | 5_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.0000000001 |
Pvalue mlog | 10 |
P value text | |
Or beta | 0.054 |
%95 Ci | [0.038-0.07] s.d. increase |
Platform | Affymetrix, Illumina, Perlegen [up to 9657952] (imputed) |
CNV | N |
Mapped trait | low density lipoprotein cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004611 |
Study accession | GCST002898 |