SNP Detail For rs41266839
1.Mapping Information
Human SNP ID rs41266839
Human chromosome chr6
Human SNP position 26409662
Pig chromosome chr7
Pig SNP position 22271511
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region6p22.2
Chromosome idchr6
Chromosome position26409662
Reported geneNR
Mapped geneBTN3A2, BTN3A1
Upstream gene id
Downstream gene id
SNP gene ids11118, 11119
Upstream gene distance
Downstream gene distance
SNP risk allelers41266839-G
SNPsrs41266839
Merged
SNP id current41266839
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value7E-27
Pvalue mlog26.1549019599857
P value text
Or beta1.25
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048