SNP Detail For rs412000
1.Mapping Information
Human SNP ID rs412000
Human chromosome chr17
Human SNP position 58631697
Pig chromosome chr12
Pig SNP position 35847691
2.Annotation Information
PubMed ID23704328
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23704328
StudyGenome-wide association study of primary tooth eruption identifies pleiotropic loci associated with height and craniofacial distances.
Disease/TraitPrimary tooth development (time to first tooth eruption)
Initial sample11,118 European ancestry individuals
Replication sample
Region17q22
Chromosome idchr17
Chromosome position58631697
Reported geneRAD51C, TEX14
Mapped geneTEX14
Upstream gene id
Downstream gene id
SNP gene ids56155
Upstream gene distance
Downstream gene distance
SNP risk allelers412000-C
SNPsrs412000
Merged0
SNP id current412000
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta0.1641
%95 Ci[0.11-0.22] unit decrease
PlatformIllumina [2446724] (imputed)
CNVN
Mapped traittooth eruption
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0044691
Study accessionGCST002030