Human SNP ID | rs412000 |
---|---|
Human chromosome | chr17 |
Human SNP position | 58631697 |
Pig chromosome | chr12 |
Pig SNP position | 35847691 |
PubMed ID | 23704328 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23704328 |
Study | Genome-wide association study of primary tooth eruption identifies pleiotropic loci associated with height and craniofacial distances. |
Disease/Trait | Primary tooth development (time to first tooth eruption) |
Initial sample | 11,118 European ancestry individuals |
Replication sample | |
Region | 17q22 |
Chromosome id | chr17 |
Chromosome position | 58631697 |
Reported gene | RAD51C, TEX14 |
Mapped gene | TEX14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 56155 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs412000-C |
SNPs | rs412000 |
Merged | 0 |
SNP id current | 412000 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 0.1641 |
%95 Ci | [0.11-0.22] unit decrease |
Platform | Illumina [2446724] (imputed) |
CNV | N |
Mapped trait | tooth eruption |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0044691 |
Study accession | GCST002030 |