Human SNP ID | rs410644 |
---|---|
Human chromosome | chr5 |
Human SNP position | 81791715 |
Pig chromosome | chr2 |
Pig SNP position | 92237202 |
PubMed ID | 21079607 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/21079607 |
Study | A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa. |
Disease/Trait | Anorexia nervosa |
Initial sample | 1,033 European ancestry cases, 3,733 European ancestry controls |
Replication sample | NA |
Region | 5q14.1 |
Chromosome id | chr5 |
Chromosome position | 81791715 |
Reported gene | SSBP2 |
Mapped gene | SSBP2 - SHFM1P1 |
Upstream gene id | 23635 |
Downstream gene id | 153842 |
SNP gene ids | |
Upstream gene distance | 40462 |
Downstream gene distance | 100723 |
SNP risk allele | rs410644-? |
SNPs | rs410644 |
Merged | 0 |
SNP id current | 410644 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.47 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 598000] |
CNV | N |
Mapped trait | anorexia nervosa |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004215 |
Study accession | GCST000873 |