SNP Detail For rs410644
1.Mapping Information
Human SNP ID rs410644
Human chromosome chr5
Human SNP position 81791715
Pig chromosome chr2
Pig SNP position 92237202
2.Annotation Information
PubMed ID21079607
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21079607
StudyA genome-wide association study on common SNPs and rare CNVs in anorexia nervosa.
Disease/TraitAnorexia nervosa
Initial sample1,033 European ancestry cases, 3,733 European ancestry controls
Replication sampleNA
Region5q14.1
Chromosome idchr5
Chromosome position81791715
Reported geneSSBP2
Mapped geneSSBP2 - SHFM1P1
Upstream gene id23635
Downstream gene id153842
SNP gene ids
Upstream gene distance40462
Downstream gene distance100723
SNP risk allelers410644-?
SNPsrs410644
Merged0
SNP id current410644
Contextintergenic_variant
Intergenic1
Allele frequency0.47
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [~ 598000]
CNVN
Mapped traitanorexia nervosa
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004215
Study accessionGCST000873