Human SNP ID | rs409224 |
---|---|
Human chromosome | chr7 |
Human SNP position | 102221930 |
Pig chromosome | chr3 |
Pig SNP position | 9417631 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-3 polyunsaturated fatty acid level (eicosapentaenoic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 7q22.1 |
Chromosome id | chr7 |
Chromosome position | 102221930 |
Reported gene | NR |
Mapped gene | CUX1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1523 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs409224-C |
SNPs | rs409224 |
Merged | |
SNP id current | 409224 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0645 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.1748 |
%95 Ci | [0.1-0.25] unit decrease |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003241 |
PubMed ID | 26584805 |
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-3 polyunsaturated fatty acid levels (docosahexaenoic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 7q22.1 |
Chromosome id | chr7 |
Chromosome position | 102221930 |
Reported gene | NR |
Mapped gene | CUX1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1523 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs409224-C |
SNPs | rs409224 |
Merged | |
SNP id current | 409224 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.0645 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.202 |
%95 Ci | unit decrease |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003240 |