SNP Detail For rs4074373
1.Mapping Information
Human SNP ID rs4074373
Human chromosome chr16
Human SNP position 83521920
Pig chromosome chr6
Pig SNP position 5548526
2.Annotation Information
PubMed ID24204828
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24204828
StudyGenome-wide contribution of genotype by environment interaction to variation of diabetes-related traits.
Disease/TraitHomeostasis model assessment of beta-cell function (interaction)
Initial sample820 European ancestry individuals
Replication sampleNA
Region16q23.3
Chromosome idchr16
Chromosome position83521920
Reported geneCDH13
Mapped geneCDH13
Upstream gene id
Downstream gene id
SNP gene ids1012
Upstream gene distance
Downstream gene distance
SNP risk allelers4074373-G
SNPsrs4074373
Merged0
SNP id current4074373
Contextintron_variant
Intergenic0
Allele frequency0.158
P value0.000007
Pvalue mlog5.15490195998574
P value text(n-6 PUFA)
Or beta
%95 Ci
PlatformAffymetrix [590000]
CNVN
Mapped traitHOMA-B
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004469
Study accessionGCST002251