Human SNP ID | rs4072910 |
---|---|
Human chromosome | chr19 |
Human SNP position | 8579147 |
Pig chromosome | chr2 |
Pig SNP position | 71118588 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 19p13.2 |
Chromosome id | chr19 |
Chromosome position | 8579147 |
Reported gene | ADAMTS10 |
Mapped gene | MYO1F - ADAMTS10 |
Upstream gene id | 4542 |
Downstream gene id | 81794 |
SNP gene ids | |
Upstream gene distance | 1700 |
Downstream gene distance | 1093 |
SNP risk allele | rs4072910-C |
SNPs | rs4072910 |
Merged | 0 |
SNP id current | 4072910 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.46 |
P value | 0.0000000000004 |
Pvalue mlog | 12.397940008672 |
P value text | |
Or beta | 0.031 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |
PubMed ID | 25282103 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25282103 |
Study | Defining the role of common variation in the genomic and biological architecture of adult human height. |
Disease/Trait | Height |
Initial sample | 253,288 European ancestry individuals |
Replication sample | 80,067 European ancestry individuals |
Region | 19p13.2 |
Chromosome id | chr19 |
Chromosome position | 8579147 |
Reported gene | ADAMTS10 |
Mapped gene | MYO1F - ADAMTS10 |
Upstream gene id | 4542 |
Downstream gene id | 81794 |
SNP gene ids | |
Upstream gene distance | 1700 |
Downstream gene distance | 1093 |
SNP risk allele | rs4072910-C |
SNPs | rs4072910 |
Merged | 0 |
SNP id current | 4072910 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.442 |
P value | 0.000000000000000001 |
Pvalue mlog | 18 |
P value text | |
Or beta | 0.032 |
%95 Ci | [0.024-0.04] unit decrease |
Platform | Affymetrix, Illumina, Perlegen [2550858] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST002647 |