SNP Detail For rs4006531
1.Mapping Information
Human SNP ID rs4006531
Human chromosome chr8
Human SNP position 125855261
Pig chromosome chr4
Pig SNP position 14578140
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (Dihydroxy docosatrienoic acid)
Initial sample1,260 African American individuals
Replication sampleNA
Region8q24.13
Chromosome idchr8
Chromosome position125855261
Reported geneLOC100130231
Mapped geneLOC105375747 - LOC105375748
Upstream gene id105375747
Downstream gene id105375748
SNP gene ids
Upstream gene distance105318
Downstream gene distance4564
SNP risk allelers4006531-A
SNPsrs4006531
Merged0
SNP id current4006531
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta0.11
%95 Ci[0.07-0.16] unit increase
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitdihydroxy docosatrienoic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005275
Study accessionGCST002120