Human SNP ID | rs394819 |
---|---|
Human chromosome | chr19 |
Human SNP position | 44901322 |
Pig chromosome | chr6 |
Pig SNP position | 47265229 |
PubMed ID | 26339675 |
---|---|
Journal | Ann Clin Transl Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/26339675 |
Study | F-box/LRR-repeat protein 7 is genetically associated with Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease (late onset) |
Initial sample | 2,451 Caribbean Hispanic cases, 2,063 Caribbean Hispanic controls |
Replication sample | 550 Caribbean Hispanic cases, 236 Caribbean Hispanic controls |
Region | 19q13.32 |
Chromosome id | chr19 |
Chromosome position | 44901322 |
Reported gene | TOMM40, APOE |
Mapped gene | TOMM40 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10452 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs394819-T |
SNPs | rs394819 |
Merged | |
SNP id current | 394819 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.00000000008 |
Pvalue mlog | 10.096910013008 |
P value text | |
Or beta | 1.89 |
%95 Ci | [1.55-2.3] |
Platform | Affymetrix, Illumina [8837542] (imputed) |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST002983 |