SNP Detail For rs3936060
1.Mapping Information
Human SNP ID rs3936060
Human chromosome chr5
Human SNP position 125011395
Pig chromosome chr2
Pig SNP position 133628776
2.Annotation Information
PubMed ID23669352
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23669352
StudyGenome-wide analysis of BMI in adolescents and young adults reveals additional insight into the effects of genetic loci over the life course.
Disease/TraitBody mass index
Initial sampleUp to 13,627 European ancestry individuals
Replication sampleUp to 16,253 European ancestry individuals
Region5q23.2
Chromosome idchr5
Chromosome position125011395
Reported geneZNF608
Mapped geneLOC105379158 - LOC101927421
Upstream gene id105379158
Downstream gene id101927421
SNP gene ids
Upstream gene distance15292
Downstream gene distance25436
SNP risk allelers3936060-C
SNPsrs3936060
Merged0
SNP id current3936060
Contextregulatory_region_variant
Intergenic1
Allele frequency0.81
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.049
%95 Ci[0.027-0.071] unit decrease
PlatformAffymetrix, Illumina [557887] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002021