SNP Detail For rs3934467
1.Mapping Information
Human SNP ID rs3934467
Human chromosome chr1
Human SNP position 162212887
Pig chromosome chr4
Pig SNP position 96359775
2.Annotation Information
PubMed ID24952745
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24952745
StudyGenetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.
Disease/TraitQT interval
Initial sampleUp to 70,389 European ancestry individuals, up to 672 Orcadian individuals
Replication sampleUp to 33,316 European ancestry individuals
Region1q23.3
Chromosome idchr1
Chromosome position162212887
Reported geneNOS1AP
Mapped geneNOS1AP
Upstream gene id
Downstream gene id
SNP gene ids9722
Upstream gene distance
Downstream gene distance
SNP risk allelers3934467-T
SNPsrs3934467
Merged0
SNP id current3934467
Contextintron_variant
Intergenic0
Allele frequency0.222
P value3E-129
Pvalue mlog128.52287874528
P value text
Or beta2.74
%95 Ci[2.52-2.96] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST002500