SNP Detail For rs3930234
1.Mapping Information
Human SNP ID rs3930234
Human chromosome chr3
Human SNP position 184498342
Pig chromosome chr13
Pig SNP position 131878937
2.Annotation Information
PubMed ID21529783
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21529783
StudyA quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.
Disease/TraitAlcoholism (alcohol use disorder factor score)
Initial sample2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls
Replication sample3,393 European ancestry individuals
Region3q27.1
Chromosome idchr3
Chromosome position184498342
Reported geneintergenic
Mapped geneLOC105374252
Upstream gene id
Downstream gene id
SNP gene ids105374252
Upstream gene distance
Downstream gene distance
SNP risk allelers3930234-C
SNPsrs3930234
Merged0
SNP id current3930234
Contextdownstream_gene_variant
Intergenic0
Allele frequency0.15
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.104
%95 Ci[NR] unit increase
PlatformIllumina [~ 300000]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001053