SNP Detail For rs391760
1.Mapping Information
Human SNP ID rs391760
Human chromosome chr5
Human SNP position 144031781
Pig chromosome chr2
Pig SNP position 151919596
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region5q31.3
Chromosome idchr5
Chromosome position144031781
Reported geneNR
Mapped geneHMHB1 - YIPF5
Upstream gene id57824
Downstream gene id81555
SNP gene ids
Upstream gene distance211062
Downstream gene distance126378
SNP risk allelers391760-?
SNPsrs391760
Merged0
SNP id current391760
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306