SNP Detail For rs3914132
1.Mapping Information
Human SNP ID rs3914132
Human chromosome chr7
Human SNP position 103886922
Pig chromosome chr9
Pig SNP position 114531924
2.Annotation Information
PubMed ID19230858
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19230858
StudyA genome-wide analysis identifies genetic variants in the RELN gene associated with otosclerosis.
Disease/TraitOtosclerosis
Initial sample302 cases, 302 controls
Replication sample847 cases, 872 controls
Region7q22.1
Chromosome idchr7
Chromosome position103886922
Reported geneRELN
Mapped geneRELN
Upstream gene id
Downstream gene id
SNP gene ids5649
Upstream gene distance
Downstream gene distance
SNP risk allelers3914132-?
SNPsrs3914132
Merged0
SNP id current3914132
Contextintron_variant
Intergenic0
Allele frequency0.23
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta1.54
%95 Ci[1.32-1.79]
PlatformIllumina [~ 555000]
CNVN
Mapped traitOtosclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004213
Study accessionGCST000345