Human SNP ID | rs3853444 |
---|---|
Human chromosome | chr4 |
Human SNP position | 110812980 |
Pig chromosome | chr8 |
Pig SNP position | 119604104 |
PubMed ID | 24778558 |
---|---|
Journal | Balkan J Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24778558 |
Study | RTN4 and FBXL17 Genes are Associated with Coronary Heart Disease in Genome-Wide Association Analysis of Lithuanian Families. |
Disease/Trait | Coronary heart disease |
Initial sample | 31 European ancestry cases and 63 European ancestry controls from 32 families |
Replication sample | NA |
Region | 4q25 |
Chromosome id | chr4 |
Chromosome position | 110812980 |
Reported gene | intergenic |
Mapped gene | PITX2 - MIR297 |
Upstream gene id | 5308 |
Downstream gene id | 100126354 |
SNP gene ids | |
Upstream gene distance | 170857 |
Downstream gene distance | 47602 |
SNP risk allele | rs3853444-G |
SNPs | rs3853444 |
Merged | 0 |
SNP id current | 3853444 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 7.69 |
%95 Ci | [2.70-20.0] |
Platform | Illumina [646445] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST002298 |