SNP Detail For rs3852053
1.Mapping Information
Human SNP ID rs3852053
Human chromosome chr3
Human SNP position 187219412
Pig chromosome chr13
Pig SNP position 134365932
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region3q27.3
Chromosome idchr3
Chromosome position187219412
Reported geneMASP1
Mapped geneMASP1
Upstream gene id
Downstream gene id
SNP gene ids5648
Upstream gene distance
Downstream gene distance
SNP risk allelers3852053-?
SNPsrs3852053
Merged0
SNP id current3852053
Context3_prime_UTR_variant
Intergenic0
Allele frequency
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337