SNP Detail For rs3849491
1.Mapping Information
Human SNP ID rs3849491
Human chromosome chr3
Human SNP position 76435032
Pig chromosome chr6
Pig SNP position 89303610
2.Annotation Information
PubMed ID22675492
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22675492
StudyGenome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women.
Disease/TraitSex hormone-binding globulin levels
Initial sample1,598 European ancestry female individuals
Replication sampleNA
Region3p12.3
Chromosome idchr3
Chromosome position76435032
Reported geneintergenic
Mapped geneROBO2
Upstream gene id
Downstream gene id
SNP gene ids6092
Upstream gene distance
Downstream gene distance
SNP risk allelers3849491-T
SNPsrs3849491
Merged0
SNP id current3849491
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.48
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.073
%95 Ci[NR] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitsex hormone globulin binding measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004696
Study accessionGCST001554