SNP Detail For rs3847153
1.Mapping Information
Human SNP ID rs3847153
Human chromosome chr8
Human SNP position 100800928
Pig chromosome chr4
Pig SNP position 39059702
2.Annotation Information
PubMed ID21989058
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21989058
StudyAssociation of 8q22.3 locus in Chinese Han with idiopathic premature ovarian failure (POF).
Disease/TraitPremature ovarian failure
Initial sample391 Han Chinese ancestry cases, 895 Han Chinese ancestry controls
Replication sample400 Han Chinese ancestry cases, 800 Han Chinese ancestry controls
Region8q22.3
Chromosome idchr8
Chromosome position100800928
Reported geneintergenic
Mapped geneLOC105375673 - RPS26P6
Upstream gene id105375673
Downstream gene id392256
SNP gene ids
Upstream gene distance55077
Downstream gene distance94812
SNP risk allelers3847153-?
SNPsrs3847153
Merged0
SNP id current3847153
Contextintergenic_variant
Intergenic1
Allele frequency0.38
P value0.00000009
Pvalue mlog7.04575749056067
P value text
Or beta1.42
%95 Ci[NR]
PlatformAffymetrix [642069]
CNVN
Mapped traitprimary ovarian insufficiency
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004266
Study accessionGCST001284