Human SNP ID | rs3847153 |
---|---|
Human chromosome | chr8 |
Human SNP position | 100800928 |
Pig chromosome | chr4 |
Pig SNP position | 39059702 |
PubMed ID | 21989058 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21989058 |
Study | Association of 8q22.3 locus in Chinese Han with idiopathic premature ovarian failure (POF). |
Disease/Trait | Premature ovarian failure |
Initial sample | 391 Han Chinese ancestry cases, 895 Han Chinese ancestry controls |
Replication sample | 400 Han Chinese ancestry cases, 800 Han Chinese ancestry controls |
Region | 8q22.3 |
Chromosome id | chr8 |
Chromosome position | 100800928 |
Reported gene | intergenic |
Mapped gene | LOC105375673 - RPS26P6 |
Upstream gene id | 105375673 |
Downstream gene id | 392256 |
SNP gene ids | |
Upstream gene distance | 55077 |
Downstream gene distance | 94812 |
SNP risk allele | rs3847153-? |
SNPs | rs3847153 |
Merged | 0 |
SNP id current | 3847153 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.38 |
P value | 0.00000009 |
Pvalue mlog | 7.04575749056067 |
P value text | |
Or beta | 1.42 |
%95 Ci | [NR] |
Platform | Affymetrix [642069] |
CNV | N |
Mapped trait | primary ovarian insufficiency |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004266 |
Study accession | GCST001284 |