SNP Detail For rs384627
1.Mapping Information
Human SNP ID rs384627
Human chromosome chr10
Human SNP position 117577235
Pig chromosome chr14
Pig SNP position 139078308
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region10q26.11
Chromosome idchr10
Chromosome position117577235
Reported geneEMX2
Mapped geneEMX2 - LOC102724627
Upstream gene id2018
Downstream gene id102724627
SNP gene ids
Upstream gene distance27689
Downstream gene distance157699
SNP risk allelers384627-A
SNPsrs384627
Merged0
SNP id current384627
Contextupstream_gene_variant
Intergenic1
Allele frequency0.006
P value0.000005
Pvalue mlog5.30102999566398
P value text(TBF-b1 )
Or beta0.03
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traittransforming growth factor beta measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004818
Study accessionGCST001762