Human SNP ID | rs3845529 |
---|---|
Human chromosome | chr1 |
Human SNP position | 215963278 |
Pig chromosome | chr10 |
Pig SNP position | 8165699 |
PubMed ID | 25234806 |
---|---|
Journal | Eur Respir J |
Link | www.ncbi.nlm.nih.gov/pubmed/25234806 |
Study | Dissecting the genetics of chronic mucus hypersecretion in smokers with and without COPD. |
Disease/Trait | Chronic mucus hypersecretion |
Initial sample | 342 European ancestry cases, 1,006 European ancestry controls |
Replication sample | 130 European ancestry cases, 2,313 European ancestry controls |
Region | 1q41 |
Chromosome id | chr1 |
Chromosome position | 215963278 |
Reported gene | USH2A |
Mapped gene | USH2A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7399 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3845529-? |
SNPs | rs3845529 |
Merged | 0 |
SNP id current | 3845529 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.45 |
%95 Ci | [NR] |
Platform | Illumina [522636] |
CNV | N |
Mapped trait | chronic mucus hypersecretion |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005673 |
Study accession | GCST002613 |