SNP Detail For rs3845529
1.Mapping Information
Human SNP ID rs3845529
Human chromosome chr1
Human SNP position 215963278
Pig chromosome chr10
Pig SNP position 8165699
2.Annotation Information
PubMed ID25234806
JournalEur Respir J
Linkwww.ncbi.nlm.nih.gov/pubmed/25234806
StudyDissecting the genetics of chronic mucus hypersecretion in smokers with and without COPD.
Disease/TraitChronic mucus hypersecretion
Initial sample342 European ancestry cases, 1,006 European ancestry controls
Replication sample130 European ancestry cases, 2,313 European ancestry controls
Region1q41
Chromosome idchr1
Chromosome position215963278
Reported geneUSH2A
Mapped geneUSH2A
Upstream gene id
Downstream gene id
SNP gene ids7399
Upstream gene distance
Downstream gene distance
SNP risk allelers3845529-?
SNPsrs3845529
Merged0
SNP id current3845529
Contextintron_variant
Intergenic0
Allele frequency0.58
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.45
%95 Ci[NR]
PlatformIllumina [522636]
CNVN
Mapped traitchronic mucus hypersecretion
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005673
Study accessionGCST002613