Human SNP ID | rs3843306 |
---|---|
Human chromosome | chr1 |
Human SNP position | 90822573 |
Pig chromosome | chr4 |
Pig SNP position | 137612914 |
PubMed ID | 22424883 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/22424883 |
Study | Genome-wide association study of lung function decline in adults with and without asthma. |
Disease/Trait | Pulmonary function decline |
Initial sample | 1,441 European ancestry asthma cases, 2,677 European ancestry controls |
Replication sample | 1,160 European ancestry asthma cases, 10,858 European ancestry controls |
Region | 1p22.2 |
Chromosome id | chr1 |
Chromosome position | 90822573 |
Reported gene | intergenic |
Mapped gene | LOC105378853 - LOC105378855 |
Upstream gene id | 105378853 |
Downstream gene id | 105378855 |
SNP gene ids | |
Upstream gene distance | 33086 |
Downstream gene distance | 21783 |
SNP risk allele | rs3843306-? |
SNPs | rs3843306 |
Merged | 0 |
SNP id current | 3843306 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (FEV1 decline in asthmatics) |
Or beta | 0.1763 |
%95 Ci | [0.10-0.25] unit increase |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314 |
Study accession | GCST001444 |