Human SNP ID | rs3827886 |
---|---|
Human chromosome | chr12 |
Human SNP position | 14507250 |
Pig chromosome | chr5 |
Pig SNP position | 61439666 |
PubMed ID | 22952603 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22952603 |
Study | Genome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13). |
Disease/Trait | Response to amphetamines |
Initial sample | 1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals |
Replication sample | NA |
Region | 12p13.1 |
Chromosome id | chr12 |
Chromosome position | 14507250 |
Reported gene | PLBD1 |
Mapped gene | PLBD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 79887 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3827886-? |
SNPs | rs3827886 |
Merged | 0 |
SNP id current | 3827886 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (SF9) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5476100] (imputed) |
CNV | N |
Mapped trait | response to drug |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042493 |
Study accession | GCST001651 |