SNP Detail For rs3825776
1.Mapping Information
Human SNP ID rs3825776
Human chromosome chr15
Human SNP position 58454631
Pig chromosome chr1
Pig SNP position 125645582
2.Annotation Information
PubMed ID18084291
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/18084291
StudyGenetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample737 European ancestry cases, 721 European ancestry controls
Replication sample1,030 European ancestry cases, 1,195 European ancestry controls
Region15q21.3
Chromosome idchr15
Chromosome position58454631
Reported geneLIPC
Mapped geneLIPC, LOC101928694
Upstream gene id
Downstream gene id
SNP gene ids3990, 101928694
Upstream gene distance
Downstream gene distance
SNP risk allelers3825776-?
SNPsrs3825776
Merged0
SNP id current3825776
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.29
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.34
%95 Ci[1.20-1.46]
PlatformIllumina [311946]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST000127