Human SNP ID | rs3825776 |
---|---|
Human chromosome | chr15 |
Human SNP position | 58454631 |
Pig chromosome | chr1 |
Pig SNP position | 125645582 |
PubMed ID | 18084291 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18084291 |
Study | Genetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis. |
Disease/Trait | Amyotrophic lateral sclerosis |
Initial sample | 737 European ancestry cases, 721 European ancestry controls |
Replication sample | 1,030 European ancestry cases, 1,195 European ancestry controls |
Region | 15q21.3 |
Chromosome id | chr15 |
Chromosome position | 58454631 |
Reported gene | LIPC |
Mapped gene | LIPC, LOC101928694 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3990, 101928694 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3825776-? |
SNPs | rs3825776 |
Merged | 0 |
SNP id current | 3825776 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.29 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 1.34 |
%95 Ci | [1.20-1.46] |
Platform | Illumina [311946] |
CNV | N |
Mapped trait | amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000253 |
Study accession | GCST000127 |