SNP Detail For rs3824756
1.Mapping Information
Human SNP ID rs3824756
Human chromosome chr10
Human SNP position 102599593
Pig chromosome chr14
Pig SNP position 123449398
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region10q24.32
Chromosome idchr10
Chromosome position102599593
Reported geneSUFU
Mapped geneSUFU
Upstream gene id
Downstream gene id
SNP gene ids51684
Upstream gene distance
Downstream gene distance
SNP risk allelers3824756-C
SNPsrs3824756
Merged0
SNP id current3824756
Contextintron_variant
Intergenic0
Allele frequency0.09
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA)
Or beta0.025
%95 Ci[0.015-0.035] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region10q24.32
Chromosome idchr10
Chromosome position102599593
Reported geneSUFU
Mapped geneSUFU
Upstream gene id
Downstream gene id
SNP gene ids51684
Upstream gene distance
Downstream gene distance
SNP risk allelers3824756-C
SNPsrs3824756
Merged0
SNP id current3824756
Contextintron_variant
Intergenic0
Allele frequency0.104
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta0.025
%95 Ci[0.015-0.035] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783