SNP Detail For rs3817428
1.Mapping Information
Human SNP ID rs3817428
Human chromosome chr15
Human SNP position 88872016
Pig chromosome chr7
Pig SNP position 59482292
2.Annotation Information
PubMed ID25429064
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25429064
StudyMeta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.
Disease/TraitHeight
Initial sample36,227 East Asian ancestry individuals
Replication sample57,699 East Asian ancestry individuals
Region15q26.1
Chromosome idchr15
Chromosome position88872016
Reported geneACAN
Mapped geneACAN
Upstream gene id
Downstream gene id
SNP gene ids176
Upstream gene distance
Downstream gene distance
SNP risk allelers3817428-C
SNPsrs3817428
Merged0
SNP id current3817428
Contextmissense_variant
Intergenic0
Allele frequency0.89
P value0.00000000009
Pvalue mlog10.0457574905606
P value text
Or beta0.046
%95 Ci[0.026-0.066] unit increase
PlatformAffymetrix, Illumina [2704730] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002702