SNP Detail For rs3813579
1.Mapping Information
Human SNP ID rs3813579
Human chromosome chr16
Human SNP position 79715379
Pig chromosome chr6
Pig SNP position 8464881
2.Annotation Information
PubMed ID21565293
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21565293
StudyGenome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.
Disease/TraitThyroid volume
Initial sample3,620 European ancestry individuals
Replication sample1,290 European ancestry individuals
Region16q23.2
Chromosome idchr16
Chromosome position79715379
Reported geneMAF
Mapped geneLOC105371356
Upstream gene id
Downstream gene id
SNP gene ids105371356
Upstream gene distance
Downstream gene distance
SNP risk allelers3813579-A
SNPsrs3813579
Merged0
SNP id current3813579
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.518
P value0.0000000004
Pvalue mlog9.39794000867203
P value text(goiter)
Or beta1.32
%95 Ci[1.21-1.44]
PlatformAffymetrix [2748910] (imputed)
CNVN
Mapped traitthyroid volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004865
Study accessionGCST001069