SNP Detail For rs3811321
1.Mapping Information
Human SNP ID rs3811321
Human chromosome chr14
Human SNP position 22013585
Pig chromosome chr17
Pig SNP position 59531815
2.Annotation Information
PubMed ID23432519
JournalClin Transplant
Linkwww.ncbi.nlm.nih.gov/pubmed/23432519
StudyA genome-wide association study of recipient genotype and medium-term kidney allograft function.
Disease/TraitRenal transplant outcome
Initial sample263 European ancestry individuals
Replication sample
Region14q11.2
Chromosome idchr14
Chromosome position22013585
Reported geneTRAV19, TRAV20
Mapped geneTRAV19 - TRAV20
Upstream gene id28664
Downstream gene id28663
SNP gene ids
Upstream gene distance5404
Downstream gene distance27078
SNP risk allelers3811321-C
SNPsrs3811321
Merged0
SNP id current3811321
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequencyNR
P value0.00000008
Pvalue mlog7.09691001300805
P value text(Five-year creatinine)
Or beta0.481
%95 Ci[NR] unit increase
PlatformIllumina [511662]
CNVN
Mapped traitrenal transplant outcome measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005199
Study accessionGCST001871