Human SNP ID | rs3809346 |
---|---|
Human chromosome | chr13 |
Human SNP position | 110308596 |
Pig chromosome | chr11 |
Pig SNP position | 84513265 |
PubMed ID | 22144573 |
---|---|
Journal | Circulation |
Link | www.ncbi.nlm.nih.gov/pubmed/22144573 |
Study | Genome-wide association study for coronary artery calcification with follow-up in myocardial infarction. |
Disease/Trait | Coronary artery calcification |
Initial sample | 9,961 European ancestry individuals |
Replication sample | 6,032 European ancestry individuals |
Region | 13q34 |
Chromosome id | chr13 |
Chromosome position | 110308596 |
Reported gene | COL4A2 |
Mapped gene | COL4A2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1284 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3809346-A |
SNPs | rs3809346 |
Merged | 0 |
SNP id current | 3809346 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | |
Or beta | 0.102 |
%95 Ci | [0.061-0.143] % increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | coronary artery calcification |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004723 |
Study accession | GCST001347 |