SNP Detail For rs3809346
1.Mapping Information
Human SNP ID rs3809346
Human chromosome chr13
Human SNP position 110308596
Pig chromosome chr11
Pig SNP position 84513265
2.Annotation Information
PubMed ID22144573
JournalCirculation
Linkwww.ncbi.nlm.nih.gov/pubmed/22144573
StudyGenome-wide association study for coronary artery calcification with follow-up in myocardial infarction.
Disease/TraitCoronary artery calcification
Initial sample9,961 European ancestry individuals
Replication sample6,032 European ancestry individuals
Region13q34
Chromosome idchr13
Chromosome position110308596
Reported geneCOL4A2
Mapped geneCOL4A2
Upstream gene id
Downstream gene id
SNP gene ids1284
Upstream gene distance
Downstream gene distance
SNP risk allelers3809346-A
SNPsrs3809346
Merged0
SNP id current3809346
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.102
%95 Ci[0.061-0.143] % increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST001347