SNP Detail For rs3809128
1.Mapping Information
Human SNP ID rs3809128
Human chromosome chr12
Human SNP position 56316135
Pig chromosome chr5
Pig SNP position 23206069
2.Annotation Information
PubMed ID25429064
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25429064
StudyMeta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.
Disease/TraitHeight
Initial sample36,227 East Asian ancestry individuals
Replication sample57,699 East Asian ancestry individuals
Region12q13.3
Chromosome idchr12
Chromosome position56316135
Reported genePAN2
Mapped geneCNPY2
Upstream gene id
Downstream gene id
SNP gene ids10330
Upstream gene distance
Downstream gene distance
SNP risk allelers3809128-T
SNPsrs3809128
Merged0
SNP id current3809128
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.21
P value7E-35
Pvalue mlog34.1549019599857
P value text
Or beta0.083
%95 Ci[0.065-0.101] unit decrease
PlatformAffymetrix, Illumina [2704730] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002702